Package: TPES 1.0.0

TPES: Tumor Purity Estimation using SNVs

A bioinformatics tool for the estimation of the tumor purity from sequencing data. It uses the set of putative clonal somatic single nucleotide variants within copy number neutral segments to call tumor cellularity.

Authors:Alessio Locallo <[email protected]>, Davide Prandi <[email protected]>, Francesca Demichelis <[email protected]>

TPES_1.0.0.tar.gz
TPES_1.0.0.zip(r-4.7-any)TPES_1.0.0.zip(r-4.6-any)TPES_1.0.0.zip(r-4.5-any)
TPES_1.0.0.tgz(r-4.6-any)TPES_1.0.0.tgz(r-4.5-any)
TPES_1.0.0.tar.gz(r-4.7-any)TPES_1.0.0.tar.gz(r-4.6-any)
TPES_1.0.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
TPES/json (API)

# Install 'TPES' in R:
install.packages('TPES', repos = c('https://l0ka.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.38 score 2 stars 12 scripts 135 downloads 1 mentions 2 exports 0 dependencies

Last updated from:cb659b3cf8. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK105
source / vignettesOK179
linux-release-x86_64OK101
macos-release-arm64OK163
macos-oldrel-arm64OK135
windows-develOK74
windows-releaseOK62
windows-oldrelOK63
wasm-releaseOK82

Exports:TPES_purityTPES_report

Dependencies: