Package: TPES 1.0.0

TPES: Tumor Purity Estimation using SNVs

A bioinformatics tool for the estimation of the tumor purity from sequencing data. It uses the set of putative clonal somatic single nucleotide variants within copy number neutral segments to call tumor cellularity.

Authors:Alessio Locallo <[email protected]>, Davide Prandi <[email protected]>, Francesca Demichelis <[email protected]>

TPES_1.0.0.tar.gz
TPES_1.0.0.zip(r-4.7-any)TPES_1.0.0.zip(r-4.6-any)TPES_1.0.0.zip(r-4.5-any)
TPES_1.0.0.tgz(r-4.6-any)TPES_1.0.0.tgz(r-4.5-any)
TPES_1.0.0.tar.gz(r-4.7-any)TPES_1.0.0.tar.gz(r-4.6-any)
TPES_1.0.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
TPES/json (API)

# Install 'TPES' in R:
install.packages('TPES', repos = c('https://l0ka.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.38 score 2 stars 12 scripts 206 downloads 1 mentions 2 exports 0 dependencies

Last updated from:cb659b3cf8. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develOK107
source / vignettesOK118
linux-releaseOK100
macos-releaseOK162
macos-oldrelOK171
windows-develOK104
windows-releaseOK65
windows-oldrelOK62
wasm-releaseOK75

Exports:TPES_purityTPES_report

Dependencies: